Ligand clusters for UniProt code J9VFT1

Ligand clusters for J9VFT1: Acetyl-coenzyme A synthetase from Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)

		Top 6 (of 22) ligand clusters Cluster 1. 11 ligand types 21 ligands Cluster 2. 2 ligand types 4 ligands Cluster 3. 2 ligand types 6 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 2 ligands
Representative protein: 5u29A

Structures

PDB		Schematic diagram
5u29A
5k85A
5ifiA
7knpA
5k8fA
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 5vpv(C),
_Mg		2. Metal: _MG × 1 PDB code: 5k8f(A).
		3. Ligand: PRX × 4 Adenosine-5'-Monophosphate-Propyl ester PDB codes: 5ifi(A), 5k85(A),
		4. Ligand: 6R9 × 2 [[(2~{r},3~{s},4~{r},5~{r})-5-(6-Aminopurin-9-Yl)-3,4- Bis(oxidanyl)oxolan-2-Yl]methoxy-Oxidanyl- Phosphoryl] ethanoate PDB codes: 5k8f(A), 7l4g(A).
		5. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 5k8f(A), 7kno(C).
		6. Ligand: PO4 × 2 Phosphate ion PDB codes: 5vpv(A),
		7. Ligand: WT7 × 2 5'-O-[(S)-Butoxy(hydroxy)phosphoryl]adenosine PDB codes: 7knp(A),
		8. Ligand: WTA × 2 5'-O-[(S)-Ethoxy(hydroxy)phosphoryl]adenosine PDB codes: 7kno(A),
		9. Ligand: 7RM × 1 5'-O-(Acetylsulfamoyl)adenosine PDB code: 5u29(A).
		10. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 5k8f(A).
		11. Ligand: COA × 1 Coenzyme a PDB code: 5k85(C).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 5vpv(A),
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 7knp(A),

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: EDO × 3 1,2-Ethanediol PDB codes: 5ifi(A), 5k85(A), 7l4g(A).
		2. Ligand: PO4 × 3 Phosphate ion PDB codes: 7kno(A), 7knp(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 5vpv(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 5u29(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: PO4 × 2 Phosphate ion PDB codes: 7kno(A), 7l4g(A).