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Ligand clusters for UniProt code J3BZS6

Ligand clusters for J3BZS6: L-lysine 4-hydroxylase from Flavobacterium sp. (strain CF136)

6 ligand clusters
Cluster 1.
8 ligand types
17 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6exhA  
JSmol
 

Structures

PDB   Schematic diagram
6exhA    
6euoA    
6f9pA    
6exfA    
6eurA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 5
PDB codes: 6euo(A), 6eur(A), 6exf(A), 6exh(A).


 
2. Ligand: LYS × 3
l-lysine
PDB codes: 6exf(A),


 
3. Ligand: SIN × 1
succinic acid
Succinic acid
PDB code: 6exh(A).


 
4. Ligand: SO4 × 3
Sulfate ion
PDB codes: 6euo(A), 6f9p(A),

_Re
 
5. Metal: _RE × 2
PDB codes: 6f9p(A),


 
6. Ligand: AKG × 1
2-Oxoglutaric acid
PDB code: 6eur(A).


 
7. Ligand: LYO × 1
4-Hydroxy-Lysine
PDB code: 6exh(A).


 
8. Ligand: MLT × 1
D-Malate
PDB code: 6euo(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 6euo(A), 6eur(A), 6exh(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 6euo(A), 6eur(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6eur(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6eur(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6exf(B).

 

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