Ligand clusters for UniProt code F4NBQ8

Ligand clusters for F4NBQ8: MHC class I antigen (Fragment) from Homo sapiens

		Top 6 (of 13) ligand clusters Cluster 1. 8 ligand types 15 ligands Cluster 2. 3 ligand types 12 ligands Cluster 3. 2 ligand types 12 ligands Cluster 4. 2 ligand types 4 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 2 ligand types 2 ligands
Representative protein: 6uzmA

Structures

PDB		Schematic diagram
6uzmA
6vb4A
6viuA
6uzoA
6vb0A
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: ACT × 4 Acetate ion PDB codes: 6uzn(A), 6vb5(A), 6vb6(A), 6vb7(A).
		2. Ligand: THR-VAL-ARG-ALA-SER-GLY-HIS-SER-TYR × 4 PDB codes: 6uzn(A), 6vb5(A), 6vb6(A), 6vb7(A).
		3. Ligand: THR-VAL-ALA-ALA-SER-GLY-HIS-SER-TYR × 2 PDB codes: 6vb4(A), 6viu(A).
		4. Ligand: GLU-LEU-ARG-ALA-ARG-GLN-GLU-CYS-TYR × 1 PDB code: 6vb2(A).
		5. Ligand: GLU-LEU-ARG-ALA-ARG-GLU-GLU-ALA-TYR × 1 PDB code: 6vb1(A).
		6. Ligand: GLU-LEU-ARG-ALA-ARG-GLU-GLU-SER-TYR × 1 PDB code: 6vb0(A).
		7. Ligand: HIS-LEU-ALA-SER-SER-GLY-HIS-SER-LEU × 1 PDB code: 6uzm(A).
		8. Ligand: HIS-LEU-ALA-SER-SER-GLY-HIS-SER-TYR × 1 PDB code: 6uzo(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 6uzm(A), 6vb6(A).
		2. Ligand: ACT × 6 Acetate ion PDB codes: 6vb2(A), 6vb4(A), 6vb5(A), 6vb7(A), 6viu(A).
		3. Ligand: EDO × 4 1,2-Ethanediol PDB codes: 6vb1(A), 6vb2(A), 6vb4(A), 6viu(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 9 glycerin Glycerol PDB codes: 6uzm(A), 6uzn(A), 6uzo(A), 6vb0(A), 6vb1(A), 6vb2(A), 6vb5(A), 6vb6(A), 6vb7(A).
		2. Ligand: EDO × 3 1,2-Ethanediol PDB codes: 6vb1(A), 6vb5(A), 6vb7(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6vb7(A).
		2. Ligand: ACT × 3 Acetate ion PDB codes: 6uzm(A), 6vb4(A), 6viu(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6vb7(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6vb7(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: ACT × 1 Acetate ion PDB code: 6uzm(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6vb2(A).