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Ligand clusters for UniProt code D5X329
Ligand clusters for D5X329: Nitrogen regulatory protein P-II OS=Thiomonas intermedia (strain K12) OX=75379 GN=Tint_0114 PE=1 SV=1
4 ligand clusters
Cluster 1.
2 ligand types
8 ligands
Cluster 2.
2 ligand types
7 ligands
Cluster 3.
3 ligand types
5 ligands
Cluster 4.
2 ligand types
5 ligands
Representative protein: 5d4oA
Structures
PDB
Schematic diagram
5d4o
A
5drk
B
5ds7
B
5d4n
A
5d4o
B
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
AMP × 5
Adenosine monophosphate
PDB codes:
5d4n
(B),
5d4o
(B),
5drk
(A),
5ds7
(A),
2. Ligand:
ADP × 3
Adenosine-5'-Diphosphate
PDB codes:
5d4n
(A),
5d4o
(A),
5drk
(B).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
AMP × 5
Adenosine monophosphate
PDB codes:
5d4n
(A),
5d4o
(A),
5drk
(B),
5ds7
(A),
2. Ligand:
ADP × 2
Adenosine-5'-Diphosphate
PDB codes:
5d4n
(C),
5drk
(C).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
ACT × 2
Acetate ion
PDB codes:
5d4n
(A),
2. Ligand:
BCT × 2
Bicarbonate ion
PDB codes:
5d4o
(A),
5drk
(B).
_Cl
3. Metal:
_CL × 1
PDB code:
5ds7
(B).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
BCT × 3
Bicarbonate ion
PDB codes:
5d4o
(A),
5drk
(A).
2. Ligand:
ACT × 2
Acetate ion
PDB codes:
5d4n
(A),