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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code D4HRL0
Ligand clusters for D4HRL0: GH7 family protein OS=Limnoria quadripunctata GN=GH7B PE=2 SV=1
Top 6 (of 9) ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4gwaA
Structures
PDB
Schematic diagram
4gwa
A
4hap
A
4haq
A
4ipm
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
CBI × 2
Cellobiose
PDB codes:
4hap
(A),
4haq
(A).
2. Ligand:
TCB × 1
Thiocellobiose
PDB code:
4ipm
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRS × 2
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
4hap
(A),
4haq
(A).
_Ca
2. Metal:
_CA × 1
PDB code:
4hap
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
acetic acid
Acetate ion
PDB code:
4ipm
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
_Ca
1. Metal:
_CA × 1
PDB code:
4hap
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
4haq
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
4gwa
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
4gwa
(A).