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Ligand clusters for UniProt code D3G6S4

Ligand clusters for D3G6S4: UDP-sugar pyrophosphorylase OS=Leishmania major GN=USP PE=1 SV=1

5 ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 3oh0A  
JSmol
 

Structures

PDB   Schematic diagram
3oh0A    
3oh3A    
3oh4A    
3oh1A    
3ogzA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: GDU × 1
Galactose-Uridine-5'-Diphosphate
PDB code: 3oh2(A).


 
2. Ligand: UAD × 1
[(2r,3s,4r,5r)-5-(2,4-Dioxo-3,4-Dihydropyrimidin-1(2h)- Yl)-3,4-Dihydroxytetrahydrofuran-2-
Yl]methyl (2s,3r, 4s,5s)-3,4,5-Trihydroxytetrahydro-2h-Pyran-2-Yl dihydrogen diphosphate
PDB code: 3oh3(A).


 
3. Ligand: UGB × 1
(2s,3r,4s,5r,6r)-6-[[[(2r,3s,4r,5r)-5-(2,4- Dioxopyrimidin-1-Yl)-3,4-Dihydroxy-Oxolan-2-
Yl]methoxy-Hydroxy-Phosphoryl]oxy-Hydroxy- Phosphoryl]oxy-3,4,5-Trihydroxy-Oxane-2-
Carboxylic acid
PDB code: 3oh1(A).


 
4. Ligand: UPG × 1
Uridine-5'-Diphosphate-Glucose
PDB code: 3oh4(A).


 
5. Ligand: UTP × 1
Uridine 5'-Triphosphate
PDB code: 3oh0(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
Glycerol
PDB codes: 3ogz(A), 3oh0(A), 3oh2(A), 3oh3(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 3oh1(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
Glycerol
PDB codes: 3oh1(A), 3oh4(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 3oh3(A).

 

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