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Ligand clusters for UniProt code D3EID5

Ligand clusters for D3EID5: Mandelate racemase/muconate lactonizing protein OS=Geobacillus sp. (strain Y412MC10) GN=GYMC10_3367 PE=1 SV=1

5 ligand clusters
Cluster 1.
3 ligand types
9 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
8 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 3n4fA  
JSmol
 

Structures

PDB   Schematic diagram
3n4fA    
3vccA    
3qpeA    
3p3bA    
3opsA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 6
PDB codes: 3n4f(A), 3ops(A), 3p3b(A), 3qpe(A), 3v5f(A), 3vcc(A).


 
2. Ligand: TAR × 2
D(-)-Tartaric acid
PDB codes: 3ops(A), 3p3b(A).


 
3. Ligand: DGU × 1
D-Galacturonic acid
PDB code: 3qpe(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code: 3v5f(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 7
PDB codes: 3n4f(A), 3ops(A), 3p3b(A), 3qpe(A), 3v5c(A), 3v5f(A), 3vcc(A).


 
2. Ligand: TAR × 1
D(-)-Tartaric acid
PDB code: 3ops(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 3v5c(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 3v5c(A).

 

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