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Ligand clusters for UniProt code D3EID5
Ligand clusters for D3EID5: Mandelate racemase/muconate lactonizing protein OS=Geobacillus sp. (strain Y412MC10) GN=GYMC10_3367 PE=1 SV=1
5 ligand clusters
Cluster 1.
3 ligand types
9 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
8 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 3n4fA
Structures
PDB
Schematic diagram
3n4f
A
3vcc
A
3qpe
A
3p3b
A
3ops
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 6
PDB codes:
3n4f
(A),
3ops
(A),
3p3b
(A),
3qpe
(A),
3v5f
(A),
3vcc
(A).
2. Ligand:
TAR × 2
D(-)-Tartaric acid
PDB codes:
3ops
(A),
3p3b
(A).
3. Ligand:
DGU × 1
D-Galacturonic acid
PDB code:
3qpe
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code:
3v5f
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 7
PDB codes:
3n4f
(A),
3ops
(A),
3p3b
(A),
3qpe
(A),
3v5c
(A),
3v5f
(A),
3vcc
(A).
2. Ligand:
TAR × 1
D(-)-Tartaric acid
PDB code:
3ops
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
3v5c
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
3v5c
(A).