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EBI
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PDBsum
Ligand clusters for UniProt code C0LT34
Ligand clusters for C0LT34: Neuraminidase OS=Influenza B virus (B/Brisbane/60/2008) GN=NA PE=3 SV=1
Top 6 (of 14) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4cplA
Structures
PDB
Schematic diagram
4cpl
A
4cpn
A
4cpm
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG-BMA-MAN × 2
BMA
=Beta-D-Mannose,
MAN
=Alpha-D-Mannose,
NAG
=N-Acetyl-D-Glucosamine.
PDB codes:
4cpm
(A),
4cpn
(A).
2. Ligand:
MAN × 1
Alpha-D-Mannose
PDB code:
4cpm
(A).
3. Ligand:
NAG-NAG-BMA × 1
BMA
=Beta-D-Mannose,
NAG
=N-Acetyl-D-Glucosamine.
PDB code:
4cpl
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
ZMR × 1
zanamivir
Zanamivir
PDB code:
4cpn
(A).
2. Ligand:
G39 × 1
(3r,4r,5s)-4-(Acetylamino)-5-Amino-3-(Pentan- 3-Yloxy)cyclohex-1-Ene-1-Carboxylic acid
PDB code:
4cpm
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 1
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB code:
4cpm
(A).
2. Ligand:
NAG-NAG × 2
NAG
=N-Acetyl-D-Glucosamine.
PDB codes:
4cpl
(A),
4cpn
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4cpm
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4cpm
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4cpm
(A).