Ligand clusters for UniProt code B8GZM2

Ligand clusters for B8GZM2: Response regulator PleD OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=pleD PE=1 SV=1

		Top 6 (of 9) ligand clusters Cluster 1. 4 ligand types 4 ligands Cluster 2. 2 ligand types 2 ligands Cluster 3. 1 ligand type 2 ligands Cluster 4. 1 ligand type 4 ligands Cluster 5. 1 ligand type 4 ligands Cluster 6. 2 ligand types 5 ligands
Representative protein: 2v0nA

Structures

PDB		Schematic diagram
2v0nA
2wb4A
1w25A

Cluster 1 contains 4 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: C2E × 1 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar) -3,5,10,12-Tetrahydroxy-5,12- Dioxidooctahydro- 2h,7h-Difuro[3,2-D:3',2'-J][1,3,7,9,2 tetraoxadiphosphacyclododecine-2,9-Diyl]bis(2- Amino-1,9- Dihydro-6h-Purin-6-One) PDB code: 1w25(A).
		2. Ligand: GAV × 1 Guanosine-5'-Rp-Alpha-Thio-Triphosphate PDB code: 2v0n(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 2wb4(A).
_Mg		4. Metal: _MG × 1 PDB code: 2v0n(A).

Cluster 2 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: C2E × 1 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar) -3,5,10,12-Tetrahydroxy-5,12- Dioxidooctahydro- 2h,7h-Difuro[3,2-D:3',2'-J][1,3,7,9,2 tetraoxadiphosphacyclododecine-2,9-Diyl]bis(2- Amino-1,9- Dihydro-6h-Purin-6-One) PDB code: 2wb4(A).
		2. Ligand: GAV × 1 Guanosine-5'-Rp-Alpha-Thio-Triphosphate PDB code: 2v0n(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: C2E × 2 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar) -3,5,10,12-Tetrahydroxy-5,12- Dioxidooctahydro- 2h,7h-Difuro[3,2-D:3',2'-J][1,3,7,9,2 tetraoxadiphosphacyclododecine-2,9-Diyl]bis(2- Amino-1,9- Dihydro-6h-Purin-6-One) PDB codes: 1w25(A),

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: C2E × 4 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar) -3,5,10,12-Tetrahydroxy-5,12- Dioxidooctahydro- 2h,7h-Difuro[3,2-D:3',2'-J][1,3,7,9,2 tetraoxadiphosphacyclododecine-2,9-Diyl]bis(2- Amino-1,9- Dihydro-6h-Purin-6-One) PDB codes: 2v0n(A), 2wb4(A),

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: C2E × 4 9,9'-[(2r,3r,3as,5s,7ar,9r,10r,10as,12s,14ar) -3,5,10,12-Tetrahydroxy-5,12- Dioxidooctahydro- 2h,7h-Difuro[3,2-D:3',2'-J][1,3,7,9,2 tetraoxadiphosphacyclododecine-2,9-Diyl]bis(2- Amino-1,9- Dihydro-6h-Purin-6-One) PDB codes: 2v0n(A), 2wb4(A),

Cluster 6 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Mg		1. Metal: _MG × 3 PDB codes: 1w25(A), 2v0n(A), 2wb4(A).
		2. Ligand: BEF × 2 Beryllium trifluoride ion PDB codes: 2v0n(A), 2wb4(A).