spacer
spacer

Ligand clusters for UniProt code B4EKB3

Ligand clusters for B4EKB3: Putative hemin transport system, substrate-binding protein from Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)

5 ligand clusters
Cluster 1.
2 ligand types
8 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 5gizA  
JSmol
 

Structures

PDB   Schematic diagram
5gizA    
5gj1A    
5y8aA    
5gj0A    
5y89A    

 

 Cluster 1 contains 2 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: HEM × 6
Protoporphyrin IX containing fe
PDB codes: 5gj0(A), 5gj1(A), 5y89(A), 5y8a(A),


 
2. Ligand: ACT × 2
Acetate ion
PDB codes: 5gj0(A), 5y89(A).

 

 Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 5giz(A).

 

 Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 5giz(A).

 

 Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 5gj0(A), 5y89(A).

 

 Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 5giz(A).

 

spacer

spacer