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Ligand clusters for UniProt code A8FMJ3

Ligand clusters for A8FMJ3: Putative uncharacterized protein OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=C8J_1081 PE=4 SV=1

Top 6 (of 14) ligand clusters
Cluster 1.
10 ligand types
20 ligands
Cluster 2.
3 ligand types
6 ligands
Cluster 3.
1 ligand type
7 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4lxqA  
JSmol
 

Structures

PDB   Schematic diagram
4lxqA    
4lxyA    
4ly0A    
4ly3A    
4lxtA    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 4lxq(A), 4lxt(A), 4lxu(A), 4lxx(A).


 
2. Ligand: FON × 4
N-{[4-({[(6r)-2-Amino-5-Formyl-4-Oxo-1,4,5,6,7,8- Hexahydropteridin-6-
Yl]methyl}amino)phenyl]carbonyl}- L-Glutamic acid
PDB codes: 4lxq(A), 4lxt(A), 4lxu(A), 4lxx(A).


 
3. Ligand: 1YA × 2
N-{4-[{[(6s)-2-Amino-4-Oxo-3,4,5,6,7,8- Hexahydropteridin-6-Yl]methyl}(formyl)amino]benzoyl}- L-
Glutamic acid
PDB codes: 4lxy(A), 4ly0(A).


 
4. Ligand: T3Q × 2
[(3r,4s,5s,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2- Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5-
Methyl-2,4- Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl] hydrogen phosphate
PDB codes: 4lxt(A), 4ly3(A).


 
5. Ligand: TYD × 2
Thymidine-5'-Diphosphate
PDB codes: 4lxq(A), 4lxy(A).

_Cl
 
6. Metal: _CL × 2
PDB codes: 4lxt(A), 4lxu(A).


 
7. Ligand: 1YJ × 1
N-[4-({[(6r)-2-Amino-4-Oxo-3,4,5,6,7,8- Hexahydropteridin-6-Yl]methyl}amino)benzoyl]-L-
Glutamic acid
PDB code: 4ly3(A).


 
8. Ligand: DAU × 1
2'Deoxy-Thymidine-5'-Diphospho-Alpha-D-Glucose
PDB code: 4ly0(A).


 
9. Ligand: FNF × 1
(2r,3r,4s,5r,6r)-4-(Formylamino)-3,5-Dihydroxy-6- Methyltetrahydro-2h-Pyran-2-Yl [(2r,3s,5r)-3-
Hydroxy- 5-(5-Methyl-2,4-Dioxo-3,4-Dihydropyrimidin-1(2h)-Yl) tetrahydrofuran-2-
Yl]methyl dihydrogen diphosphate (non-Preferred name)
PDB code: 4lxx(A).


 
10. Ligand: T3F × 1
(3r,4s,5r,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2- Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5-Methyl-
2,4- Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl] hydrogen phosphate
PDB code: 4lxu(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: MPO × 3
3[n-Morpholino]propane sulfonic acid
PDB codes: 4lxq(A), 4lxt(A), 4lxx(A).

_Cl
 
2. Metal: _CL × 2
PDB codes: 4lxq(A), 4lxx(A).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4lxu(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPO × 7
3[n-Morpholino]propane sulfonic acid
PDB codes: 4lxq(A), 4lxt(A), 4lxu(A), 4lxx(A), 4lxy(A), 4ly0(A), 4ly3(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPO × 3
3[n-Morpholino]propane sulfonic acid
PDB codes: 4lxq(A), 4lxt(A), 4lxx(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 4lxq(A), 4lxt(A), 4lxu(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4lxq(A).

 

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