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Ligand clusters for UniProt code A0A4Y1WAP5

Ligand clusters for A0A4Y1WAP5: 2OG-Fe(II) oxygenase from Bacillus anthracis

Top 6 (of 22) ligand clusters
Cluster 1.
7 ligand types
12 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5v7yA  
JSmol
 

Structures

PDB   Schematic diagram
5v7yA    
5iaxA    
5iatB    
5hv0A    
5iatA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3itq(A).


 
2. Ligand: AKG × 3
2-Oxoglutaric acid
PDB codes: 5hv0(A), 5hv4(A), 5iax(A).

_Co
 
3. Metal: _CO × 3
PDB codes: 5iav(A), 5iax(A), 5v7y(A).

_Cd
 
4. Metal: _CD × 2
PDB codes: 5hv0(A), 5hv4(A).


 
5. Ligand: IMD × 1
Imidazole
PDB code: 5v7y(A).


 
6. Ligand: MLI × 1
Malonate ion
PDB code: 5iav(A).


 
7. Ligand: TFA × 1
Trifluoroacetic acid
PDB code: 5v7y(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 5iat(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 3itq(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 5iat(B).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 3itq(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5hv0(A).


 
2. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 5iax(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 5iat(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5hv0(A).

 

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