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EBI
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Ligand clusters for UniProt code A0A4Y1WAP5
Ligand clusters for A0A4Y1WAP5: 2OG-Fe(II) oxygenase from Bacillus anthracis
Top 6 (of 22) ligand clusters
Cluster 1.
7 ligand types
12 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5v7yA
Structures
PDB
Schematic diagram
5v7y
A
5iax
A
5iat
B
5hv0
A
5iat
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3itq
(A).
2. Ligand:
AKG × 3
2-Oxoglutaric acid
PDB codes:
5hv0
(A),
5hv4
(A),
5iax
(A).
_Co
3. Metal:
_CO × 3
PDB codes:
5iav
(A),
5iax
(A),
5v7y
(A).
_Cd
4. Metal:
_CD × 2
PDB codes:
5hv0
(A),
5hv4
(A).
5. Ligand:
IMD × 1
Imidazole
PDB code:
5v7y
(A).
6. Ligand:
MLI × 1
Malonate ion
PDB code:
5iav
(A).
7. Ligand:
TFA × 1
Trifluoroacetic acid
PDB code:
5v7y
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5iat
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3itq
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5iat
(B).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3itq
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5hv0
(A).
2. Ligand:
BME × 1
Beta-Mercaptoethanol
PDB code:
5iax
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5iat
(B).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5hv0
(A).