Ligand clusters for UniProt code A0A1W6IPB2

Ligand clusters for A0A1W6IPB2: Envelope glycoprotein gp160 from Human immunodeficiency virus 1

		Top 6 (of 15) ligand clusters Cluster 1. 3 ligand types 3 ligands Cluster 2. 3 ligand types 5 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 3 ligand types 3 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 2 ligand types 4 ligands
Representative protein: 6um5A

Structures

PDB		Schematic diagram
6um5A
6um6A
6um7A

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG-BMA-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6um6(A).
		2. Ligand: NAG-NAG-BMA-MAN-MAN-BMA-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6um5(A).
		3. Ligand: NAG-NAG-BMA-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6um7(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6um5(A), 6um6(A).
		2. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6um7(A).
		3. Ligand: NAG-NAG-BMA-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6um6(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG-BMA × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 6um6(A), 6um7(A).
		2. Ligand: NAG-NAG-BMA-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6um5(A).

Cluster 4 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 6um6(A).
		2. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 6um5(A).
		3. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6um7(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 6um6(A).
		2. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 6um5(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 6um5(A), 6um7(A).
		2. Ligand: NAG-NAG-BMA × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB codes: 6um5(A), 6um7(A).