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Ligand clusters for UniProt code A0A0H3AIG7
Ligand clusters for A0A0H3AIG7: Actin cross-linking toxin VgrG1 from Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Top 6 (of 11) ligand clusters
Cluster 1.
6 ligand types
22 ligands
Cluster 2.
2 ligand types
6 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
1 ligand type
6 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4dtdA
Structures
PDB
Schematic diagram
4dtd
A
4dtf
A
4e1c
A
4e1f
A
4dth
A
more ...
Cluster 1 contains 6 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 6
PDB codes:
4dtf
(A),
4dth
(A),
4e1c
(A),
_Mn
2. Metal:
_MN × 4
PDB codes:
4dtl
(A),
4e1d
(A),
3. Ligand:
SO4 × 6
Sulfate ion
PDB codes:
4dtf
(A),
4dth
(A),
4dtl
(A),
4e1c
(A),
4e1d
(A),
4e1f
(A).
4. Ligand:
ADP × 3
Adenosine-5'-Diphosphate
PDB codes:
4e1c
(A),
4e1d
(A),
4e1f
(A).
5. Ligand:
ATP × 2
Adenosine-5'-Triphosphate
PDB codes:
4dth
(A),
4dtl
(A).
6. Ligand:
ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code:
4dtf
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 5
glycerin
Glycerol
PDB codes:
4dtd
(A),
4dtf
(A),
4dth
(A),
4dtl
(A),
4e1c
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4e1f
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 6
Sulfate ion
PDB codes:
4dtf
(A),
4dth
(A),
4dtl
(A),
4e1c
(A),
4e1d
(A),
4e1f
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 6
Sulfate ion
PDB codes:
4dtf
(A),
4dth
(A),
4dtl
(A),
4e1c
(A),
4e1d
(A),
4e1f
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4dtf
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4dth
(A).