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Ligand clusters for UniProt code A0A0B4J2E0

Ligand clusters for A0A0B4J2E0: Protein TRBV12-4 (Fragment) OS=Homo sapiens GN=TRBV12-4 PE=4 SV=4

Top 6 (of 20) ligand clusters
Cluster 1.
9 ligand types
13 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5c0bE  
JSmol
 

Structures

PDB   Schematic diagram
5c0bE    
5hyjE    
5c0aE    
5c0cE    
5c09E    
 more ...

 

 Cluster 1 contains 9 ligand types

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Ligand Description


 
1. Ligand: EDO × 5
1,2-Ethanediol
PDB codes: 5c07(E), 5c08(E), 5c0b(E), 5c0c(E).


 
2. Ligand: ALA-GLN-TRP-GLY-PRO-ASP-PRO-ALA-ALA-ALA × 1
PDB code: 5hyj(E).


 
3. Ligand: ARG-GLN-PHE-GLY-PRO-ASP-PHE-PRO-THR-ILE × 1
PDB code: 5c0b(E).


 
4. Ligand: ARG-GLN-PHE-GLY-PRO-ASP-TRP-ILE-VAL-ALA × 1
PDB code: 5c0c(E).


 
5. Ligand: ARG-GLN-TRP-GLY-PRO-ASP-PRO-ALA-ALA-VAL × 1
PDB code: 5c08(E).


 
6. Ligand: GOL × 1
Glycerol
PDB code: 5c08(E).


 
7. Ligand: MET-VAL-TRP-GLY-PRO-ASP-PRO-LEU-TYR-VAL × 1
PDB code: 5c0a(E).


 
8. Ligand: TYR-GLN-PHE-GLY-PRO-ASP-PHE-PRO-ILE-ALA × 1
PDB code: 5c07(E).


 
9. Ligand: TYR-LEU-GLY-GLY-PRO-ASP-PHE-PRO-THR-ILE × 1
PDB code: 5c09(E).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 5c09(E), 5c0a(E), 5c0b(E).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5c08(E).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 5c0b(E), 5c0c(E).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 5c08(E).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5c0b(E).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 5c0a(E).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5c0b(E).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 5c0a(E).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 5c0b(E).

 

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