PDBsum entry 5kaf

Ligand/metal interactions

PDB id

5kaf


	4 instances of ligand highlighted
	PL9

Ligands

OEX ×2

SQD ×9

CLA ×70

PHO ×4

BCR ×22

PL9 ×4

PL9 407(D)

LMG ×16

UNL ×17

LHG ×10

BCT ×2

DGD

HEM ×2

HEC ×2

Metals

FE2

FE2 602(A)

_CL

CL 604(A)

Ligand PL9 - 2,3-Dimethyl-5-(3,7,11,15,19,23,27,31,35-Nonamethyl-
2, 6,10,14,18,22,26,30,34-Hexatriacontanonaenyl-2,5-
Cyclohexadiene-1,4-Dione-2,3-Dimethyl-5-Solanesyl-1,4-
Benzoquinone
[Plastoquinone 9]
Formula: C₅₃H₈₀O₂

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
PL9 407(D)	55	55	0	0	Complete		Chiral checks - OK

Additional Information

Validation carried out using MotiveValidator. Full validation report can be found in Validator^DB.

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LIGPLOT of interactions involving ligand PL9

List of
interactions

PL9 407(D)

(also representing equivalent ligand PL9 408(d) )