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PDBsum entry 5ca0
Go to PDB code:
Ligand/metal interactions
PDB id
5ca0
2 instances of ligand highlighted
LXL
Ligands
GTP
×2
GTP 501(A)
GOL
GOL 504(A)
GDP
×2
GDP 501(B)
MES
MES 503(B)
LXL
×2
LXL 504(B)
ACP
ACP 401(F)
Metals
_CA
×2
CA 503(C)
_MG
×3
MG 502(A)
MG 502(B)
Ligand
LXL
-
1-Ethyl-3-[2-Methoxy-4-(5-Methyl-4-{[(1s)-1-(Pyridin-3-
Yl)butyl]amino}pyrimidin-2-Yl)phenyl]urea
[Lexibulin]
Formula:
C
24
H
30
N
6
O
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
LXL 504(B)
32
32
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand LXL
List of
interactions
LXL 504(B)
(also representing equivalent ligand LXL 502(D) )
_CA
×2
_MG
×3
