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PDBsum entry 3w3l
Go to PDB code:
Ligand/metal interactions
PDB id
3w3l
15 instances of ligand highlighted
NAG
Ligands
NAG-NAG-BMA-MAN-
MAN
×8
NAG 1(E) to MAN 5(E)
NAG 1(G) to MAN 5(G)
NAG-NAG-BMA
×4
NAG 1(F) to BMA 3(F)
NAG
×15
NAG 1009(A)
NAG 1015(A)
NAG 1016(A)
NAG 1017(A)
SO4
×8
SO4 1018(A)
SO4 1019(A)
SO4 1020(B)
RX8
×4
RX8 1018(B)
RX8 901(C)
RX8 901(D)
Ligand
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1015(A)
15
15
1
1
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG
List of
interactions
NAG 1015(A)
also representing 3 other equivalent ligands:
NAG 1015(B)
NAG 916(C)
NAG 917(D)
