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PDBsum entry 3w3l
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Pore analysis for: 3w3l calculated with  MOLE 2.0
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PDB id
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3w3l
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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12 pores,
coloured by radius
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12 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.16 |
1.16 |
61.2 |
0.45 |
0.41 |
9.8 |
81 |
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6 |
1 |
3 |
5 |
6 |
1 |
0 |
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RX8 1018 B NAG 1 L NAG 2 L BMA 3 L NAG 1 M
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2 |
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1.74 |
1.75 |
72.7 |
-1.31 |
-0.22 |
12.7 |
90 |
5 |
0 |
10 |
5 |
1 |
1 |
0 |
NAG 1016 A
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3 |
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2.35 |
2.56 |
75.9 |
-1.99 |
-0.56 |
20.1 |
86 |
5 |
5 |
8 |
2 |
1 |
0 |
1 |
NAG 916 C SO4 918 C
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4 |
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2.35 |
2.56 |
89.8 |
-1.90 |
-0.46 |
23.4 |
83 |
7 |
6 |
7 |
2 |
3 |
0 |
1 |
NAG 916 C NAG 2 I BMA 3 I
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5 |
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2.02 |
2.17 |
114.1 |
-2.28 |
-0.37 |
30.2 |
83 |
19 |
6 |
6 |
3 |
3 |
1 |
0 |
SO4 918 C NAG 2 I BMA 3 I MAN 4 M
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6 |
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1.24 |
1.41 |
117.2 |
-0.25 |
0.06 |
9.7 |
83 |
4 |
2 |
8 |
7 |
8 |
4 |
0 |
NAG 1009 B RX8 1018 B SO4 1020 B SO4 1021 B RX8
901 C NAG 910 C
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7 |
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1.20 |
1.24 |
134.7 |
-0.79 |
0.01 |
20.6 |
82 |
15 |
6 |
5 |
7 |
6 |
2 |
0 |
RX8 1018 B SO4 1019 B NAG 2 L BMA 3 L MAN 4 M
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8 |
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1.89 |
1.95 |
132.3 |
-2.22 |
-0.26 |
31.6 |
84 |
13 |
6 |
7 |
5 |
0 |
2 |
0 |
SO4 918 C BMA 3 H MAN 4 H MAN 5 H BMA 3 J MAN 4 J
MAN 5 J MAN 4 M
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9 |
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1.21 |
1.20 |
177.0 |
-1.10 |
0.02 |
24.0 |
81 |
17 |
7 |
7 |
9 |
5 |
2 |
0 |
RX8 1018 B SO4 1019 B SO4 918 C BMA 3 H MAN 4 H M
AN 5 H BMA 3 J MAN 4 J NAG 2 L BMA 3 L
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10 |
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3.63 |
6.13 |
31.1 |
-1.89 |
-0.16 |
26.1 |
87 |
6 |
2 |
3 |
3 |
0 |
0 |
0 |
SO4 920 D
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11 |
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3.06 |
4.88 |
115.8 |
-1.78 |
-0.07 |
27.7 |
84 |
17 |
6 |
8 |
7 |
4 |
0 |
0 |
SO4 1018 A NAG 1 O NAG 2 O BMA 3 O NAG 1 P NAG 2
P BMA 3 P MAN 4 P
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12 |
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1.92 |
1.91 |
188.0 |
-1.88 |
-0.43 |
21.6 |
84 |
7 |
8 |
9 |
4 |
3 |
1 |
0 |
NAG 917 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program