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PDBsum entry 6t5f
Go to PDB code:
Ligand/metal interactions
PDB id
6t5f
Ligand highlighted
GLY-SER-LEU-ARG-
ARG-GLY-SEP-THR-
CYS
Ligands
LEU-ARG-ARG-GLY-
SEP-THR-CYS-VAL-
LEU-ALA
LEU 236(E) to ALA 245(E)
LEU-ARG-ARG-GLY-
SEP-THR-CYS
LEU 236(G) to CYS 242(G)
GLY-SER-LEU-ARG-
ARG-GLY-SEP-THR-
CYS
GLY 234(H) to CYS 242(H)
Ligand
GLY-SER-LEU-ARG-ARG-GLY-SEP-THR-CYS
-
Phosphoserine
[Phosphonoserine]
Formula:
C
3
H
8
NO
6
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 234(H)
5
-
-
-
-
-
-
-
-
-
SER 235(H)
7
6
0
0
1
0
-
-
-
-
LEU 236(H)
9
9
1
1
0
0
0
0
0
0
ARG 237(H)
12
12
1
1
0
0
0
0
0
0
ARG 238(H)
12
12
1
1
0
0
0
0
0
0
GLY 239(H)
5
-
-
-
-
-
-
-
-
-
SEP 240(H)
11
11
1
1
0
0
0
0
0
0
THR 241(H)
8
8
1
1
0
0
0
0
0
0
CYS 242(H)
7
6
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
GLY 234(H)
-
0
SER 235(H)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
LEU 236(H)
O: OXT
1
ARG 237(H)
-
0
ARG 238(H)
-
0
GLY 239(H)
-
0
SEP 240(H)
O2P: O1P
|
O1P: O2P
2
THR 241(H)
O: OXT
1
CYS 242(H)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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LIGPLOT
of interactions involving ligand GLY-SER-LEU-ARG-ARG-GLY-SEP-THR-CYS
List of
interactions
GLY 234(H) to CYS 242(H)
