spacer
spacer

PDBsum entry 6t5f

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 6t5f calculated with MOLE 2.0 PDB id
6t5f
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 4.78 4.78 30.2 -2.21 -0.76 35.4 82 2 9 1 3 0 0 1  
2 2.27 5.22 34.2 -2.49 -0.95 34.2 84 2 7 0 1 0 0 0  
3 2.34 4.67 39.7 -2.11 -0.74 32.5 83 3 5 1 2 0 0 1  
4 1.82 4.10 125.1 -0.79 -0.22 19.1 80 5 9 8 9 2 0 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer