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PDBsum entry 3ldb
Go to PDB code:
Ligand/metal interactions
PDB id
3ldb
Ligand highlighted
AKG
Ligands
GOL
×5
GOL 335(A)
GOL 336(A)
GOL 337(A)
GOL 338(A)
GOL 221(B)
SO4
×19
SO4 339(A)
SO4 340(A)
SO4 341(A)
SO4 342(A)
SO4 343(A)
SO4 344(A)
SO4 345(A)
SO4 346(A)
SO4 347(A)
SO4 348(A)
SO4 349(A)
SO4 350(A)
SO4 351(A)
SO4 222(B)
SO4 223(B)
SO4 224(B)
SO4 222(C)
SO4 223(C)
SO4 224(C)
AKG
AKG 600(A)
Metals
_HG
×2
HG 353(A)
HG 352(A)
_FE
FE 601(A)
Ligand
AKG
-
2-Oxoglutaric acid
Formula:
C
5
H
6
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
AKG 600(A)
10
10
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
AKG 600(A)
O2: O1
|
O1: O2
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand AKG
List of
interactions
AKG 600(A)
_HG
×2
_FE
