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PDBsum entry 2eim
Go to PDB code:
Ligand/metal interactions
PDB id
2eim
8 instances of ligand highlighted
PGV
Ligands
HEA
×4
HEA 515(A)
HEA 516(A)
PGV
×8
PGV 524(A)
PGV 266(C)
PGV 267(C)
PGV 268(C)
CHD
×8
CHD 525(A)
CHD 1086(B)
CHD 271(C)
CHD 60(J)
CUA
×2
CUA 228(B)
TGL
×6
TGL 521(B)
TGL 523(D)
TGL 522(L)
PSC
×2
PSC 230(B)
DMU
×4
DMU 272(C)
DMU 526(M)
PEK
×6
PEK 264(C)
PEK 265(C)
PEK 1263(G)
CDL
×4
CDL 270(C)
CDL 269(G)
Metals
_ZN
×6
ZN 99(F)
ZN 603(A)
ZN 262(C)
_CU
×2
CU 517(A)
_MG
×2
MG 518(A)
_NA
×2
NA 519(A)
Ligand
PGV
-
(1r)-2-{[{[(2s)-2,3-
Dihydroxypropyl]oxy}(hydroxy) phosphoryl]oxy}-1-
[(Palmitoyloxy)methyl]ethyl (11e)- Octadec-11-Enoate
[Phosphatidylglycerol; 2-Vaccenoyl-1-Palmitoyl-Sn- Glycerol-
3-Phosphoglycerol]
Formula:
C
40
H
77
O
10
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
PGV 267(C)
51
51
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
PGV 267(C)
O14: O13
|
O13: O14
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand PGV
List of
interactions
PGV 267(C)
(also representing equivalent ligand PGV 1267(P) )
_ZN
×6
_CU
×2
_MG
×2
