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PDBsum entry 6euf
Go to PDB code:
Ligand/metal interactions
PDB id
6euf
2 instances of ligand highlighted
GAL-GAL-BDP-RAM-
AHR-AHR
Ligands
GAL-GAL-AHR-AHR-
BDP
×2
GAL 1(E) to BDP 5(E)
GAL-GAL-BDP-RAM-
AHR-AHR
×2
GAL 1(F) to AHR 6(F)
GAL 1(G) to AHR 6(G)
Ligand
GAL-GAL-BDP-RAM-AHR-AHR
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
AHR
-
Alpha-L-Arabinofuranose [Alpha-L-Arabinose; l-Arabinose; arabinose]
Formula:
C
5
H
10
O
5
BDP
-
Beta-D-Glucopyranuronic acid [Beta-D-Glucuronic acid; d-Glucuronic acid; glucuronic acid]
Formula:
C
6
H
10
O
7
RAM
-
Alpha-L-Rhamnopyranose [Alpha-L-Rhamnose; 6-Deoxy-Alpha-L-Mannopyranose; l- Rhamnose; rhamnose]
Formula:
C
6
H
12
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GAL 1(F)
12
12
0
0
Complete
Chiral checks - OK
GAL 2(F)
12
12
1
0
Complete
Chiral checks - OK
BDP 3(F)
13
13
1
0
Complete
Chiral checks - OK
RAM 4(F)
11
11
1
0
Complete
Chiral checks - OK
AHR 5(F)
10
10
1
0
Complete
Chiral checks - OK
AHR 6(F)
10
10
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GAL-GAL-BDP-RAM-AHR-AHR
List of
interactions
GAL 1(F) to AHR 6(F)
