PDBsum entry 6euf

Pore analysis for: 6euf calculated with

MOLE 2.0

PDB id

6euf

Pores calculated on whole structure

Pores calculated excluding ligands

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17 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.72

1.90

32.5

-1.77

-0.55

13.0

80

2

3

6

1

2

1

1

GAL 1 F GAL 2 F

2

1.65

1.85

42.1

-1.84

-0.43

15.6

82

4

3

8

2

2

1

1

GAL 1 E

3

2.07

2.38

43.3

-1.17

-0.39

11.3

88

2

2

9

3

2

1

0

4

1.64

1.85

48.9

-1.05

-0.31

7.2

83

3

4

8

5

1

1

0

GAL 1 E

5

2.11

2.24

49.3

-0.79

-0.22

11.5

87

3

3

9

4

3

1

0

6

2.21

2.95

53.4

-1.21

-0.30

9.6

83

4

3

9

5

1

1

0

7

2.01

2.01

70.1

-1.78

-0.32

24.1

84

6

8

8

7

4

0

0

8

1.67

1.87

72.6

-1.74

-0.33

21.5

83

5

9

7

6

4

1

0

GAL 1 E

9

2.04

2.30

74.8

-1.67

-0.33

22.6

83

4

7

7

7

5

0

0

10

1.71

1.71

102.0

-1.22

-0.29

14.2

82

7

3

11

6

3

1

0

11

1.74

1.75

227.7

-1.59

-0.49

14.7

84

20

8

19

9

3

2

0

12

2.47

2.84

245.0

-1.54

-0.46

14.1

84

17

10

22

13

2

3

0

13

1.76

1.96

258.9

-1.58

-0.51

13.9

84

18

11

25

11

4

4

1

GAL 1 E

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.