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PDBsum entry 3d8c
Go to PDB code:
Ligand/metal interactions
PDB id
3d8c
Ligand highlighted
AKG
Ligands
SO4
×2
SO4 501(A)
SO4 502(A)
AKG
AKG 1351(A)
GOL
GOL 2000(A)
Metals
_ZN
ZN 350(A)
Ligand
AKG
-
2-Oxoglutaric acid
Formula:
C
5
H
6
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
AKG 1351(A)
10
10
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
AKG 1351(A)
O2: O1
|
O1: O2
|
O4: O3
|
O3: O4
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's reactant 2-oxoglutarate
LIGPLOT
of interactions involving ligand AKG
List of
interactions
AKG 1351(A)
_ZN
