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PDBsum entry 1v0f
Go to PDB code:
Ligand/metal interactions
PDB id
1v0f
6 instances of ligand highlighted
SLB
Ligands
SIA-SIA
×3
SIA 1(G) to SIA 2(G)
SIA 1(H) to SIA 2(H)
SIA 1(I) to SIA 2(I)
SLB
×6
SLB 1685(A)
PO4
×6
PO4 1686(A)
PO4 1687(C)
PO4 1687(D)
PO4 1686(F)
PO4 1687(F)
Ligand
SLB
-
N-Acetyl-Beta-Neuraminic acid
[N-Acetylneuraminic acid; sialic acid; o-Sialic acid; 5- N-
Acetyl-Beta-D-Neuraminic acid; beta-Sialic acid]
Formula:
C
11
H
9
NO
9
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SLB 1685(A)
21
21
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
SLB 1685(A)
O1B: O1A
|
O1A: O1B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand SLB
List of
interactions
SLB 1685(A)
also representing 5 other equivalent ligands:
SLB 1685(B)
SLB 1685(C)
SLB 1685(D)
SLB 1685(E)
SLB 1685(F)
