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PDBsum entry 1v0f
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Tunnel analysis for: 1v0f calculated with  MOLE 2.0
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PDB id
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1v0f
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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28 tunnels,
coloured by tunnel radius |
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27 tunnels,
coloured by
tunnel radius
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27 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.78 |
2.16 |
38.2 |
-0.62 |
-0.23 |
17.2 |
87 |
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4 |
3 |
2 |
4 |
1 |
1 |
0 |
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2 |
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1.65 |
1.99 |
38.4 |
-0.15 |
-0.15 |
15.1 |
89 |
4 |
3 |
3 |
5 |
1 |
1 |
0 |
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3 |
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1.66 |
2.29 |
39.2 |
-0.17 |
-0.14 |
15.1 |
88 |
4 |
3 |
2 |
5 |
1 |
1 |
0 |
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4 |
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1.64 |
1.98 |
50.1 |
-0.48 |
-0.10 |
14.3 |
85 |
3 |
4 |
5 |
6 |
4 |
1 |
0 |
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5 |
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1.64 |
2.38 |
52.8 |
-0.65 |
-0.06 |
15.0 |
85 |
4 |
4 |
6 |
7 |
4 |
1 |
0 |
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6 |
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1.58 |
2.26 |
54.2 |
-0.95 |
-0.15 |
17.0 |
85 |
4 |
4 |
6 |
6 |
4 |
1 |
0 |
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7 |
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1.62 |
1.74 |
64.4 |
-1.37 |
-0.19 |
22.5 |
81 |
6 |
7 |
5 |
7 |
3 |
3 |
0 |
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8 |
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1.16 |
1.17 |
68.6 |
-1.76 |
-0.41 |
23.1 |
76 |
6 |
9 |
1 |
5 |
3 |
3 |
0 |
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9 |
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1.19 |
1.22 |
74.9 |
-1.73 |
-0.41 |
23.4 |
76 |
6 |
8 |
1 |
6 |
5 |
3 |
0 |
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10 |
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1.54 |
3.13 |
77.7 |
-2.23 |
-0.40 |
27.0 |
78 |
8 |
12 |
3 |
4 |
4 |
3 |
0 |
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11 |
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1.28 |
2.84 |
48.5 |
0.45 |
0.14 |
13.3 |
84 |
4 |
3 |
3 |
6 |
4 |
1 |
0 |
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12 |
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1.27 |
2.91 |
50.9 |
0.74 |
0.21 |
11.8 |
82 |
4 |
3 |
2 |
6 |
4 |
1 |
0 |
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13 |
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1.27 |
2.88 |
50.4 |
0.83 |
0.26 |
11.4 |
82 |
4 |
3 |
2 |
6 |
4 |
1 |
0 |
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14 |
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1.27 |
2.89 |
55.5 |
0.26 |
0.16 |
14.8 |
78 |
5 |
5 |
2 |
7 |
8 |
1 |
0 |
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15 |
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1.27 |
2.85 |
60.4 |
0.10 |
0.16 |
12.9 |
80 |
4 |
4 |
4 |
8 |
7 |
1 |
0 |
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16 |
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1.27 |
3.13 |
59.9 |
0.05 |
0.14 |
13.4 |
82 |
4 |
4 |
6 |
8 |
7 |
1 |
0 |
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17 |
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1.27 |
3.13 |
62.2 |
0.16 |
0.14 |
12.3 |
82 |
4 |
4 |
6 |
8 |
7 |
1 |
0 |
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18 |
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1.27 |
2.86 |
62.7 |
0.00 |
0.13 |
13.0 |
82 |
4 |
4 |
6 |
8 |
7 |
1 |
0 |
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19 |
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1.28 |
3.12 |
75.9 |
-0.50 |
0.06 |
18.1 |
79 |
7 |
9 |
6 |
9 |
6 |
3 |
0 |
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20 |
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1.26 |
1.37 |
21.2 |
-0.74 |
0.21 |
16.1 |
71 |
3 |
2 |
0 |
3 |
2 |
1 |
0 |
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21 |
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1.25 |
1.37 |
23.8 |
-1.01 |
0.05 |
19.0 |
71 |
3 |
2 |
0 |
3 |
2 |
1 |
0 |
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22 |
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1.26 |
1.26 |
28.1 |
-1.14 |
-0.06 |
18.3 |
72 |
3 |
3 |
0 |
3 |
2 |
1 |
0 |
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23 |
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1.29 |
1.34 |
29.7 |
-1.14 |
-0.10 |
18.0 |
72 |
3 |
3 |
0 |
3 |
2 |
1 |
0 |
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24 |
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1.44 |
1.48 |
16.8 |
-0.54 |
-0.14 |
13.6 |
73 |
1 |
1 |
1 |
1 |
3 |
1 |
1 |
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25 |
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1.39 |
1.46 |
17.5 |
-0.57 |
-0.18 |
14.7 |
80 |
1 |
1 |
1 |
2 |
2 |
0 |
1 |
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26 |
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1.29 |
1.42 |
17.9 |
-1.15 |
-0.29 |
19.2 |
73 |
1 |
1 |
1 |
1 |
3 |
1 |
1 |
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27 |
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1.67 |
1.67 |
20.8 |
0.14 |
0.20 |
13.4 |
82 |
3 |
0 |
1 |
2 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program