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PDBsum entry 4y8s
Go to PDB code:
Ligand/metal interactions
PDB id
4y8s
6 instances of ligand highlighted
ACE-LEU-ALA-GAU-
POL
Ligands
ACE-LEU-ALA-GAU-
POL
×6
ACE 1(c) to POL 5(c)
ACE 1(d) to POL 5(d)
ACE 1(e) to POL 5(e)
MES
×2
MES 302(K)
Metals
_MG
×7
MG 301(G)
MG 301(H)
MG 302(I)
MG 301(L)
MG 201(N)
MG 301(I)
Ligand
ACE-LEU-ALA-GAU-POL
ACE
-
Acetyl group
Formula:
C
2
H
4
O
GAU
-
(4s)-4-Amino-5-Hydroxypentanoic acid [L-Glutamol]
Formula:
C
5
H
11
NO
3
POL
-
N-Propanol [1-Proponol]
Formula:
C
3
H
8
O
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ACE 1(d)
3
-
-
-
Residue too small to validate
LEU 2(d)
9
9
1
1
Complete
Chiral checks - OK
ALA 3(d)
6
-
-
-
Residue too small to validate
GAU 4(d)
9
9
1
0
Complete
Chiral checks - OK
POL 5(d)
4
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
ACE 1(d)
-
0
LEU 2(d)
O: OXT
1
ALA 3(d)
-
0
GAU 4(d)
-
0
POL 5(d)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand ACE-LEU-ALA-GAU-POL
List of
interactions
ACE 1(d) to POL 5(d)
(also representing equivalent ligand ACE 1(g) to POL 5(g) )
_MG
×7
