PDBsum entry 4y8s Go to PDB code:  Pore analysis for: 4y8s calculated with MOLE 2.0 PDB id 4y8s Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.22 2.36 37.2 -2.66 -0.62 32.5 79 6 4 1 0 1 0 0   2 1.30 2.17 88.7 -2.64 -0.55 31.5 77 10 9 5 4 2 2 0   3 1.27 2.15 99.1 -2.01 -0.35 23.2 75 11 8 7 7 7 2 1   4 1.76 2.49 100.8 -2.54 -0.56 29.1 80 13 10 4 2 3 0 0   5 1.28 2.14 103.0 -2.64 -0.45 27.7 74 15 8 5 4 7 1 0   6 1.82 3.19 107.4 -2.34 -0.34 28.8 79 17 8 6 3 6 0 0   7 1.68 2.50 127.6 -2.03 -0.47 22.1 80 14 10 9 4 6 1 1   8 1.64 2.34 135.2 -2.70 -0.62 29.8 81 16 13 8 2 2 1 0   9 1.28 2.15 136.8 -2.34 -0.49 24.3 78 13 12 9 7 4 1 0   10 1.29 1.22 141.6 -2.18 -0.47 23.8 83 14 13 12 9 4 0 0   11 1.36 1.36 149.3 -2.02 -0.42 22.7 82 17 11 13 10 7 0 0   12 1.29 1.53 152.1 -1.46 -0.26 18.7 78 16 6 10 7 12 3 0   13 1.84 2.01 161.3 -1.97 -0.40 21.8 82 13 11 13 6 9 1 0   14 1.94 2.90 162.2 -2.14 -0.52 24.5 81 17 12 10 6 9 1 0   15 1.28 2.14 163.6 -2.16 -0.42 23.1 81 13 11 13 10 6 2 0   16 1.71 1.93 176.8 -2.07 -0.49 22.3 84 14 14 14 7 5 1 0  ACE 1 c 17 1.24 1.32 199.6 -2.02 -0.51 23.5 80 20 14 9 7 6 2 0   18 1.63 2.32 197.5 -2.13 -0.43 21.9 82 19 8 14 6 9 1 1   19 1.36 2.18 200.3 -2.63 -0.44 27.6 80 22 8 13 6 9 2 0   20 1.31 2.14 203.1 -2.73 -0.50 26.0 79 22 8 11 6 9 1 0   21 1.90 1.80 205.0 -2.49 -0.49 25.2 82 23 9 11 3 10 0 0   22 1.71 1.95 213.4 -2.57 -0.51 26.7 84 23 11 14 3 8 1 0   23 1.83 2.94 216.3 -2.67 -0.59 25.4 82 23 11 12 3 8 0 0   24 1.93 2.27 219.2 -2.60 -0.53 27.4 83 22 12 14 4 6 1 0   25 1.84 2.10 223.4 -2.36 -0.52 23.6 84 22 12 16 4 8 0 0   26 1.29 2.22 229.5 -2.32 -0.44 23.2 81 20 10 16 9 9 1 0   27 1.24 1.45 235.4 -1.78 -0.30 18.9 78 19 5 16 11 13 4 0   28 1.31 1.57 248.6 -1.80 -0.36 18.9 81 20 8 17 8 12 3 0   29 1.27 1.19 245.8 -2.22 -0.48 21.9 84 21 13 21 11 7 0 0   30 1.88 2.14 258.8 -2.35 -0.56 23.5 84 21 14 17 7 9 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.