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PDBsum entry 1jyx
Go to PDB code:
Ligand/metal interactions
PDB id
1jyx
6 instances of ligand highlighted
IPT
Ligands
IPT
×6
IPT 2001(A)
IPT 2002(A)
DMS
×74
DMS 8401(A)
DMS 8402(A)
DMS 8403(A)
DMS 8404(A)
DMS 8405(A)
DMS 8407(A)
DMS 8408(A)
DMS 8409(A)
DMS 8410(A)
DMS 8411(A)
DMS 8412(A)
DMS 8413(A)
DMS 8415(A)
DMS 8420(A)
DMS 8421(A)
DMS 8501(A)
DMS 8502(A)
DMS 8602(A)
DMS 8406(B)
DMS 8420(B)
DMS 8425(B)
DMS 8406(C)
DMS 8414(C)
DMS 8422(C)
DMS 8425(C)
DMS 8503(C)
DMS 8506(C)
DMS 8417(D)
DMS 8704(D)
Metals
_MG
×9
MG 3001(A)
MG 3002(A)
MG 3007(B)
_NA
×14
NA 3101(A)
NA 3102(A)
NA 3103(A)
NA 3104(B)
NA 3104(C)
Ligand
IPT
-
1-Methylethyl 1-Thio-Beta-D-Galactopyranoside
[Isopropyl-1-Beta-D-Thiogalactoside; 1-(Isopropylthio)-
Beta-Galactopyranside; 1-Methylethyl 1-Thio-Beta-D-
Galactoside; 1-Methylethyl 1-Thio-D-Galactoside; 1-
Methylethyl 1-Thio-Galactoside]
Formula:
C
9
H
18
O
5
S
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
IPT 2002(A)
15
15
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand IPT
List of
interactions
IPT 2002(A)
(also representing equivalent ligand IPT 2002(D) )
_MG
×9
_NA
×14
