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PDBsum entry 5ekd
Go to PDB code:
Ligand/metal interactions
PDB id
5ekd
2 instances of ligand highlighted
5BX
Ligands
5BX
×2
5BX 401(A)
ATP
×2
ATP 402(A)
GOL
×2
GOL 405(B)
GOL 406(B)
Metals
_MN
×4
MN 404(A)
MN 403(A)
Ligand
5BX
-
(5s)-5-[(1r)-1-(1h-Indol-3-Yl)ethyl]-2-(Methylamino)-1, 3-
Oxazol-4(5h)-One
[Indolemycin; indolmycin]
Formula:
C
14
H
15
N
3
O
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
5BX 401(A)
19
19
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's reactant L-tryptophan with similarity 61.90%
LIGPLOT
of interactions involving ligand 5BX
List of
interactions
5BX 401(A)
(also representing equivalent ligand 5BX 401(B) )
_MN
×4
