spacer
spacer

PDBsum entry 5dnx

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) links
Ligand/metal interactions PDB id
5dnx
3 instances of ligand highlighted
5LD
Ligands
5LD ×3
5LD 203(A)
5LD 205(B)
Metals
_MN ×6
MN 201(C)
MN 202(B)
MN 203(B)
  
Ligand 5LD - [(2r)-2-Hydroxy-3-(1h-1,2,4-Triazol-1-
Yl) propyl]phosphonic acid
[(R)-C348]
Formula: C5H10N3O4P
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
5LD 203(A) 13 13 0 0 Complete Chiral checks - OK
Advanced Analysis
Residue Name Mismatches Count
5LD 203(A) O12: O10|O10: O11|O11: O12 3
Additional Information
Use mouse to move/zoom
3D Viewers:
3Dmol.js
 
  JSmol
 

Ligand matches this enzyme's reactant D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate with similarity 40.00%


LIGPLOT of interactions involving ligand 5LD

JSmol




List of
interactions
 


5LD 203(A)

(also representing equivalent ligand 5LD 201(B) )
  
spacer
spacer