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PDBsum entry 4lsp
Go to PDB code:
Ligand/metal interactions
PDB id
4lsp
Ligand highlighted
NAG-NAG-BMA
Ligands
NAG-NAG-BMA
NAG 1(A) to BMA 3(A)
NAG
×12
NAG 501(G)
NAG 502(G)
NAG 503(G)
NAG 504(G)
NAG 505(G)
NAG 506(G)
NAG 507(G)
NAG 508(G)
NAG 509(G)
NAG 510(G)
NAG 511(G)
NAG 512(G)
SO4
×3
SO4 513(G)
SO4 514(G)
SO4 304(L)
EDO
×11
EDO 515(G)
EDO 516(G)
EDO 517(G)
EDO 518(G)
EDO 519(G)
EDO 301(H)
EDO 302(H)
EDO 303(H)
EDO 304(H)
EDO 305(H)
EDO 305(L)
PEG
×2
PEG 520(G)
PEG 521(G)
Metals
_NA
×3
NA 523(G)
NA 306(H)
NA 522(G)
Ligand
NAG-NAG-BMA
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
BMA
-
Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(A)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(A)
15
15
1
0
Complete
Chiral checks - OK
BMA 3(A)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG-BMA
List of
interactions
NAG 1(A) to BMA 3(A)
_NA
×3
