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PDBsum entry 2bdm
Go to PDB code:
Ligand/metal interactions
PDB id
2bdm
Ligand highlighted
HEM-TMI
Ligands
HEM-TMI
HEM 500(A) to TMI 501(A)
TMI
×2
TMI 502(A)
TMI 503(A)
CM5
×4
CM5 504(A)
CM5 505(A)
CM5 506(A)
CM5 507(A)
Ligand
HEM-TMI
HEM
-
Protoporphyrin IX containing fe [Heme]
Formula:
C
34
H
32
FeN
4
O
4
TMI
-
1-[Phenyl-(4-Phenylphenyl)-Methyl]imidazole [Bifonazole]
Formula:
C
22
H
18
N
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
HEM 500(A)
43
43
0
0
Complete
Chiral checks - OK
TMI 501(A)
24
24
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
HEM 500(A)
O2A: O1A
|
O1A: O2A
|
O2D: O1D
|
O1D: O2D
4
TMI 501(A)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand HEM-TMI
List of
interactions
HEM 500(A) to TMI 501(A)
