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PDBsum entry 1v1m
Go to PDB code:
Ligand/metal interactions
PDB id
1v1m
Ligand highlighted
TPP
Ligands
TPP
TPP 1401(A)
BEN
BEN 1406(A)
GOL
×3
GOL 2344(B)
GOL 2345(B)
GOL 2346(B)
Metals
__K
×2
K 2347(B)
K 1404(A)
_CL
×3
CL 1402(A)
CL 1403(A)
CL 2343(B)
_MN
MN 1405(A)
Ligand
TPP
-
Thiamine diphosphate
Formula:
C
12
H
19
N
4
O
7
P
2
S
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
TPP 1401(A)
26
26
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
TPP 1401(A)
O2A: O1A
|
O1A: O2A
|
O2B: O1B
|
O1B: O3B
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand corresponds to this enzyme's cofactor thiamine diphosphate
LIGPLOT
of interactions involving ligand TPP
List of
interactions
TPP 1401(A)
__K
×2
_MN
