Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 1agf
Go to PDB code:
Ligand/metal interactions
PDB id
1agf
Ligand highlighted
GLY-GLY-LYS-LYS-
ARG-TYR-LYS-LEU
Ligands
GLY-GLY-LYS-LYS-
ARG-TYR-LYS-LEU
GLY 1(C) to LEU 8(C)
Ligand
GLY-GLY-LYS-LYS-ARG-TYR-LYS-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 1(C)
5
-
-
-
Residue too small to validate
GLY 2(C)
5
-
-
-
Residue too small to validate
LYS 3(C)
10
10
1
1
Complete
Chiral checks - OK
LYS 4(C)
10
10
1
1
Complete
Chiral checks - OK
ARG 5(C)
12
12
1
1
Complete
Chiral checks - OK
TYR 6(C)
13
13
1
1
Complete
Chiral checks - OK
LYS 7(C)
10
10
1
1
Complete
Chiral checks - OK
LEU 8(C)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLY 1(C)
-
0
GLY 2(C)
-
0
LYS 3(C)
-
0
LYS 4(C)
O: OXT
1
ARG 5(C)
-
0
TYR 6(C)
O: OXT
1
LYS 7(C)
-
0
LEU 8(C)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand GLY-GLY-LYS-LYS-ARG-TYR-LYS-LEU
List of
interactions
GLY 1(C) to LEU 8(C)
