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PDBsum entry 7rgo

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protein ligands Protein-protein interface(s) links
Oxidoreductase/oxidoreductase inhibitor PDB id
7rgo

 

 

 

 

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Contents
Protein chains
157 a.a.
Ligands
NAP ×2
GOL
4SI ×2
SO4 ×2
Waters ×128
PDB id:
7rgo
Name: Oxidoreductase/oxidoreductase inhibitor
Title: Dfra5 complexed with NADPH and 4'-chloro-3'-(4-(2,4-diamino-6- ethylpyrimidin-5-yl)but-3-yn-2-yl)-[1,1'-biphenyl]-4-carboxamide (ucp1228)
Structure: Dihydrofolate reductase type 5. Chain: a, b. Synonym: dihydrofolate reductase type v. Engineered: yes
Source: Escherichia coli. Organism_taxid: 562. Gene: dhfrv. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
1.92Å     R-factor:   0.194     R-free:   0.227
Authors: M.N.Lombardo,D.L.Wright
Key ref: J.Krucinska et al. (2022). Structure-Guided functional studies of plasmid-Encode dihydrofolate reductases reveal a common mechanism of trimethoprim resistance in gram-Negative pathogens.. Commun biol, 5, 459. PubMed id: 35562546
Date:
15-Jul-21     Release date:   25-May-22    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P11731  (DYR5_ECOLX) -  Dihydrofolate reductase type 5 from Escherichia coli
Seq:
Struc:
157 a.a.
157 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.1.5.1.3  - dihydrofolate reductase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Folate Coenzymes
      Reaction: (6S)-5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH + H+
(6S)-5,6,7,8-tetrahydrofolate
+
NADP(+)
Bound ligand (Het Group name = NAP)
corresponds exactly
= 7,8-dihydrofolate
+ NADPH
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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