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PDBsum entry 7k5h

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protein ligands metals Protein-protein interface(s) links
Oxidoreductase PDB id
7k5h

 

 

 

 

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Contents
Protein chains
(+ 6 more) 156 a.a.
Ligands
HEM ×7
VXV ×11
Metals
__K ×3
Waters ×1015
PDB id:
7k5h
Name: Oxidoreductase
Title: 1.90 a resolution structure of wt bfrb from pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor km-5-66
Structure: Ferroxidase. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Fragment: bfrb. Engineered: yes
Source: Pseudomonas aeruginosa. Organism_taxid: 208964. Strain: atcc 15692 / pao1 / 1c / prs 101 / lmg 12228. Gene: bfrb, pa3531. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.90Å     R-factor:   0.159     R-free:   0.189
Authors: S.Lovell,K.P.Battaile,A.Soldano,A.Punchi-Hewage,K.Meraz,J.K.Annor- Gyamfi,H.Yao,R.A.Bunce,M.Rivera
Key ref: A.Soldano et al. (2021). Small Molecule Inhibitors of the Bacterioferritin (BfrB)-Ferredoxin (Bfd) Complex Kill Biofilm-Embedded Pseudomonas aeruginosa Cells. ACS Infect Dis, 7, 123-140. PubMed id: 33269912 DOI: 10.1021/acsinfecdis.0c00669
Date:
16-Sep-20     Release date:   16-Dec-20    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9HY79  (Q9HY79_PSEAE) -  Bacterioferritin from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Seq:
Struc:
158 a.a.
156 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.1.16.3.1  - ferroxidase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 4 Fe2+ + O2 + 4 H+ = 4 Fe3+ + 2 H2O
4 × Fe(2+)
+ O2
+ 4 × H(+)
= 4 × Fe(3+)
+ 2 × H2O
      Cofactor: Cu cation
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Key reference    
 
 
DOI no: 10.1021/acsinfecdis.0c00669 ACS Infect Dis 7:123-140 (2021)
PubMed id: 33269912  
 
 
Small Molecule Inhibitors of the Bacterioferritin (BfrB)-Ferredoxin (Bfd) Complex Kill Biofilm-Embedded Pseudomonas aeruginosa Cells.
A.Soldano, H.Yao, A.N.D.Punchi Hewage, K.Meraz, J.K.Annor-Gyamfi, R.A.Bunce, K.P.Battaile, S.Lovell, M.Rivera.
 
  ABSTRACT  
 
Bacteria depend on a well-regulated iron homeostasis to survive adverse environments. A key component of the iron homeostasis machinery is the compartmentalization of Fe3+ in bacterioferritin and its subsequent mobilization as Fe2+ to satisfy metabolic requirements. In Pseudomonas aeruginosa Fe3+ is compartmentalized in bacterioferritin (BfrB), and its mobilization to the cytosol requires binding of a ferredoxin (Bfd) to reduce the stored Fe3+ and release the soluble Fe2+. Blocking the BfrB-Bfd complex in P. aeruginosa by deletion of the bfd gene triggers an irreversible accumulation of Fe3+ in BfrB, concomitant cytosolic iron deficiency and significant impairment of biofilm development. Herein we report that small molecules developed to bind BfrB at the Bfd binding site block the BfrB-Bfd complex, inhibit the mobilization of iron from BfrB in P. aeruginosa cells, elicit a bacteriostatic effect on planktonic cells, and are bactericidal to cells embedded in mature biofilms.
 

 

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