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PDBsum entry 5oqw

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protein ligands metals Protein-protein interface(s) links
Apoptosis PDB id
5oqw

 

 

 

 

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Contents
Protein chains
106 a.a.
Ligands
A4E ×2
Metals
_ZN ×2
_NA
Waters ×224
PDB id:
5oqw
Name: Apoptosis
Title: Xiap in complex with small molecule
Structure: E3 ubiquitin-protein ligase xiap. Chain: a, b. Synonym: baculoviral iap repeat-containing protein 4,iap-like protein,hilp,inhibitor of apoptosis protein 3,hiap3,ring-type e3 ubiquitin transferase xiap,x-linked inhibitor of apoptosis protein,x- linked iap. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: xiap, api3, birc4, iap3. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Resolution:
2.31Å     R-factor:   0.215     R-free:   0.246
Authors: P.A.Williams
Key ref: G.A.Ward et al. (2018). ASTX660, a Novel Non-peptidomimetic Antagonist of cIAP1/2 and XIAP, Potently Induces TNFα-Dependent Apoptosis in Cancer Cell Lines and Inhibits Tumor Growth. Mol Cancer Ther, 17, 1381-1391. PubMed id: 29695633 DOI: 10.1158/1535-7163.MCT-17-0848
Date:
14-Aug-17     Release date:   27-Jun-18    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
P98170  (XIAP_HUMAN) -  E3 ubiquitin-protein ligase XIAP from Homo sapiens
Seq:
Struc:
497 a.a.
106 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.2.3.2.27  - RING-type E3 ubiquitin transferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6- ubiquitinyl-[acceptor protein]-L-lysine

 

 
DOI no: 10.1158/1535-7163.MCT-17-0848 Mol Cancer Ther 17:1381-1391 (2018)
PubMed id: 29695633  
 
 
ASTX660, a Novel Non-peptidomimetic Antagonist of cIAP1/2 and XIAP, Potently Induces TNFα-Dependent Apoptosis in Cancer Cell Lines and Inhibits Tumor Growth.
G.A.Ward, E.J.Lewis, J.S.Ahn, C.N.Johnson, J.F.Lyons, V.Martins, J.M.Munck, S.J.Rich, T.Smyth, N.T.Thompson, P.A.Williams, N.E.Wilsher, N.G.Wallis, G.Chessari.
 
  ABSTRACT  
 
Because of their roles in the evasion of apoptosis, inhibitor of apoptosis proteins (IAP) are considered attractive targets for anticancer therapy. Antagonists of these proteins have the potential to switch prosurvival signaling pathways in cancer cells toward cell death. Various SMAC-peptidomimetics with inherent cIAP selectivity have been tested clinically and demonstrated minimal single-agent efficacy. ASTX660 is a potent, non-peptidomimetic antagonist of cIAP1/2 and XIAP, discovered using fragment-based drug design. The antagonism of XIAP and cIAP1 by ASTX660 was demonstrated on purified proteins, cells, and in vivo in xenograft models. The compound binds to the isolated BIR3 domains of both XIAP and cIAP1 with nanomolar potencies. In cells and xenograft tissue, direct antagonism of XIAP was demonstrated by measuring its displacement from caspase-9 or SMAC. Compound-induced proteasomal degradation of cIAP1 and 2, resulting in downstream effects of NIK stabilization and activation of noncanonical NF-κB signaling, demonstrated cIAP1/2 antagonism. Treatment with ASTX660 led to TNFα-dependent induction of apoptosis in various cancer cell lines in vitro, whereas dosing in mice bearing breast and melanoma tumor xenografts inhibited tumor growth. ASTX660 is currently being tested in a phase I-II clinical trial (NCT02503423), and we propose that its antagonism of cIAP1/2 and XIAP may offer improved efficacy over first-generation antagonists that are more cIAP1/2 selective. Mol Cancer Ther; 17(7); 1381-91. ©2018 AACR.
 

 

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