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PDBsum entry 5nx2

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protein ligands links
Membrane protein PDB id
5nx2

 

 

 

 

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Contents
Protein chain
389 a.a.
Ligands
9DK-9DQ-GLY-THR-
9DT-THR-SER-ASP-
9DW-9DZ
NAG-NAG
NAG
SOG ×3
PDB id:
5nx2
Name: Membrane protein
Title: Crystal structure of thermostabilised full-length glp-1r in complex with a truncated peptide agonist at 3.7 a resolution
Structure: Glucagon-like peptide 1 receptor. Chain: a. Fragment: unp residues 24-432. Synonym: glp-1r. Engineered: yes. Mutation: yes. Truncated peptide agonist. Chain: b. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: glp1r. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Synthetic: yes. Synthetic construct. Organism_taxid: 32630
Resolution:
3.70Å     R-factor:   0.287     R-free:   0.334
Authors: M.Rappas,A.Jazayeri,A.J.H.Brown,J.Kean,J.C.Errey,N.Robertson,C.Fiez- Vandal,S.P.Andrews,M.Congreve,A.Bortolato,J.S.Mason,A.H.Baig, I.Teobald,A.S.Dore,M.Weir,R.M.Cooke,F.H.Marshall
Key ref: A.Jazayeri et al. (2017). Crystal structure of the GLP-1 receptor bound to a peptide agonist. Nature, 546, 254-258. PubMed id: 28562585
Date:
09-May-17     Release date:   14-Jun-17    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P43220  (GLP1R_HUMAN) -  Glucagon-like peptide 1 receptor from Homo sapiens
Seq:
Struc:
463 a.a.
389 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 12 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.?
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Nature 546:254-258 (2017)
PubMed id: 28562585  
 
 
Crystal structure of the GLP-1 receptor bound to a peptide agonist.
A.Jazayeri, M.Rappas, A.J.H.Brown, J.Kean, J.C.Errey, N.J.Robertson, C.Fiez-Vandal, S.P.Andrews, M.Congreve, A.Bortolato, J.S.Mason, A.H.Baig, I.Teobald, A.S.Doré, M.Weir, R.M.Cooke, F.H.Marshall.
 
  ABSTRACT  
 
Glucagon-like peptide 1 (GLP-1) regulates glucose homeostasis through the control of insulin release from the pancreas. GLP-1 peptide agonists are efficacious drugs for the treatment of diabetes. To gain insight into the molecular mechanism of action of GLP-1 peptides, here we report the crystal structure of the full-length GLP-1 receptor bound to a truncated peptide agonist. The peptide agonist retains an α-helical conformation as it sits deep within the receptor-binding pocket. The arrangement of the transmembrane helices reveals hallmarks of an active conformation similar to that observed in class A receptors. Guided by this structural information, we design peptide agonists with potent in vivo activity in a mouse model of diabetes.
 

 

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