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PDBsum entry 5nx2
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Tunnel analysis for: 5nx2 calculated with  MOLE 2.0
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PDB id
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5nx2
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.62 |
2.07 |
34.8 |
0.92 |
0.47 |
6.8 |
80 |
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1 |
2 |
2 |
10 |
4 |
0 |
0 |
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2 |
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1.31 |
1.53 |
40.8 |
-0.51 |
0.08 |
21.4 |
78 |
3 |
3 |
0 |
10 |
4 |
0 |
0 |
9DK 1 B
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3 |
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1.08 |
1.82 |
41.6 |
0.20 |
0.15 |
9.8 |
71 |
3 |
2 |
0 |
7 |
4 |
1 |
0 |
9DK 1 B 9DQ 2 B 9DT 5 B 9DW 9 B
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4 |
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1.25 |
1.44 |
50.8 |
-0.25 |
-0.11 |
12.5 |
75 |
4 |
4 |
1 |
6 |
4 |
1 |
0 |
SOG 604 A 9DK 1 B 9DQ 2 B 9DT 5 B 9DW 9 B 9DZ 10 B
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5 |
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1.58 |
1.70 |
60.3 |
0.56 |
0.26 |
7.7 |
69 |
3 |
4 |
1 |
12 |
7 |
1 |
0 |
9DK 1 B 9DQ 2 B 9DT 5 B 9DW 9 B 9DZ 10 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program