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PDBsum entry 4zjv

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protein Protein-protein interface(s) links
Transferase/inhibitor PDB id
4zjv

 

 

 

 

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Contents
Protein chains
282 a.a.
48 a.a.
44 a.a.
Waters ×96
PDB id:
4zjv
Name: Transferase/inhibitor
Title: Crystal structure of egfr kinase domain in complex with mitogen- inducible gene 6 protein
Structure: Epidermal growth factor receptor. Chain: a, b. Fragment: kinase domain (unp residues 695-1022). Synonym: proto-oncogenE C-erbb-1,receptor tyrosine-protein kinase erbb-1. Engineered: yes. Erbb receptor feedback inhibitor 1. Chain: c, d. Fragment: unp residues 330-399.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: egfr, erbb, erbb1, her1. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108. Gene: errfi1, mig6. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.70Å     R-factor:   0.181     R-free:   0.232
Authors: M.J.Eck,E.Park,B.Lee
Key ref: E.Park et al. (2015). Structure and mechanism of activity-based inhibition of the EGF receptor by Mig6. Nat Struct Biol, 22, 703-711. PubMed id: 26280531 DOI: 10.1038/nsmb.3074
Date:
29-Apr-15     Release date:   12-Aug-15    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P00533  (EGFR_HUMAN) -  Epidermal growth factor receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1210 a.a.
282 a.a.
Protein chain
Pfam   ArchSchema ?
Q9UJM3  (ERRFI_HUMAN) -  ERBB receptor feedback inhibitor 1 from Homo sapiens
Seq:
Struc:
462 a.a.
48 a.a.*
Protein chain
Pfam   ArchSchema ?
Q9UJM3  (ERRFI_HUMAN) -  ERBB receptor feedback inhibitor 1 from Homo sapiens
Seq:
Struc:
462 a.a.
44 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: Chains A, B: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1038/nsmb.3074 Nat Struct Biol 22:703-711 (2015)
PubMed id: 26280531  
 
 
Structure and mechanism of activity-based inhibition of the EGF receptor by Mig6.
E.Park, N.Kim, S.B.Ficarro, Y.Zhang, B.I.Lee, A.Cho, K.Kim, A.K.Park, W.Y.Park, B.Murray, M.Meyerson, R.Beroukhim, J.A.Marto, J.Cho, M.J.Eck.
 
  ABSTRACT  
 
Mig6 is a feedback inhibitor that directly binds, inhibits and drives internalization of ErbB-family receptors. Mig6 selectively targets activated receptors. Here we found that the epidermal growth factor receptor (EGFR) phosphorylates Mig6 on Y394 and that this phosphorylation is primed by prior phosphorylation of an adjacent residue, Y395, by Src. Crystal structures of human EGFR-Mig6 complexes reveal the structural basis for enhanced phosphorylation of primed Mig6 and show how Mig6 rearranges after phosphorylation by EGFR to effectively irreversibly inhibit the same receptor that catalyzed its phosphorylation. This dual phosphorylation site allows Mig6 to inactivate EGFR in a manner that requires activation of the target receptor and that can be modulated by Src. Loss of Mig6 is a driving event in human cancer; analysis of 1,057 gliomas reveals frequent focal deletions of ERRFI1, the gene that encodes Mig6, in EGFR-amplified glioblastomas.
 

 

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