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PDBsum entry 4jkj

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protein ligands Protein-protein interface(s) links
Hydrolase PDB id
4jkj

 

 

 

 

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Contents
Protein chains
223 a.a.
Ligands
SO4 ×3
Waters ×95
PDB id:
4jkj
Name: Hydrolase
Title: Crystal structure of the s18y variant of ubiquitin carboxy-terminal hydrolase l1
Structure: Ubiquitin carboxyl-terminal hydrolase isozyme l1. Chain: a, b. Synonym: uch-l1, neuron cytoplasmic protein 9.5, pgp 9.5, pgp9.5, ubiquitin thioesterase l1. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: uchl1. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Resolution:
2.15Å     R-factor:   0.198     R-free:   0.245
Authors: C.W.Davies,D.Ringe,G.A.Petsko,C.Das
Key ref: C.W.Davies et al. Crystal structure of the s18y variant of ubiquitin carboxy-Terminal hydrolase l1. To be published, .
Date:
09-Mar-13     Release date:   28-May-14    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
P09936  (UCHL1_HUMAN) -  Ubiquitin carboxyl-terminal hydrolase isozyme L1 from Homo sapiens
Seq:
Struc:
223 a.a.
223 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.3.4.19.12  - ubiquitinyl hydrolase 1.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Thiol-dependent hydrolysis of ester, thiolester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

 

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