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PDBsum entry 4cax

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protein ligands links
Transferase PDB id
4cax

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
387 a.a.
Ligands
MYA
646
Waters ×299
PDB id:
4cax
Name: Transferase
Title: Crystal structure of aspergillus fumigatus n-myristoyl transferase in complex with myristoyl coa and a pyrazole sulphonamide ligand (ddd85646)
Structure: Glycylpeptide n-tetradecanoyltransferase. Chain: a. Fragment: residues 86-492. Synonym: myristoyl-coa\:protein n-myristoyltransferase, nmt, peptide n-myristoyltransferase. Engineered: yes
Source: Aspergillus fumigatus. Organism_taxid: 746128. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: plyss.
Resolution:
1.85Å     R-factor:   0.225     R-free:   0.276
Authors: O.G.Raimi,D.A.Robinson,W.Fang,D.E.Blair,J.Harrison,G.F.Ruda, D.E.A.Lockhart,L.S.Torrie,P.G.Wyatt,I.H.Gilbert,D.M.F.Van Aalten
Key ref: W.Fang et al. (2015). N-myristoyltransferase is a cell wall target in Aspergillus fumigatus. Acs Chem Biol, 10, 1425-1434. PubMed id: 25706802 DOI: 10.1021/cb5008647
Date:
09-Oct-13     Release date:   17-Sep-14    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q9UVX3  (NMT_ASPFU) -  Glycylpeptide N-tetradecanoyltransferase from Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293)
Seq:
Struc:
492 a.a.
387 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.3.1.97  - glycylpeptide N-tetradecanoyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: N-terminal glycyl-[protein] + tetradecanoyl-CoA = N-tetradecanoylglycyl- [protein] + CoA + H+
N-terminal glycyl-[protein]
+
tetradecanoyl-CoA
Bound ligand (Het Group name = MYA)
corresponds exactly
= N-tetradecanoylglycyl- [protein]
+ CoA
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1021/cb5008647 Acs Chem Biol 10:1425-1434 (2015)
PubMed id: 25706802  
 
 
N-myristoyltransferase is a cell wall target in Aspergillus fumigatus.
W.Fang, D.A.Robinson, O.G.Raimi, D.E.Blair, J.R.Harrison, D.E.Lockhart, L.S.Torrie, G.F.Ruda, P.G.Wyatt, I.H.Gilbert, D.M.van Aalten.
 
  ABSTRACT  
 
Treatment of filamentous fungal infections relies on a limited repertoire of antifungal agents. Compounds possessing novel modes of action are urgently required. N-myristoylation is a ubiquitous modification of eukaryotic proteins. The enzyme N-myristoyltransferase (NMT) has been considered a potential therapeutic target in protozoa and yeasts. Here, we show that the filamentous fungal pathogen Aspergillus fumigatus possesses an active NMT enzyme that is essential for survival. Surprisingly, partial repression of the gene revealed downstream effects of N-myristoylation on cell wall morphology. Screening a library of inhibitors led to the discovery of a pyrazole sulphonamide compound that inhibits the enzyme and is fungicidal under partially repressive nmt conditions. Together with a crystallographic complex showing the inhibitor binding in the peptide substrate pocket, we provide evidence of NMT being a potential drug target in A. fumigatus.
 

 

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