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PDBsum entry 4fn6

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protein ligands Protein-protein interface(s) links
Transcription PDB id
4fn6

 

 

 

 

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Contents
Protein chains
225 a.a.
Ligands
ACT ×9
GOL ×4
Waters ×81
PDB id:
4fn6
Name: Transcription
Title: Structural characterization of thiaminase type ii tena from staphylococcus aureus
Structure: Thiaminase-2. Chain: a, b, c, d. Synonym: thiaminase ii. Engineered: yes
Source: Staphylococcus aureus. Organism_taxid: 282458. Strain: mrsa252. Gene: tena, sar2183. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.69Å     R-factor:   0.216     R-free:   0.258
Authors: A.Begum,J.Drebes,M.Perbandt,C.Wrenger,C.Betzel
Key ref: A.Begum et al. Structural characterization of thiaminase type ii ten staphylococcus aureus. To be published, .
Date:
19-Jun-12     Release date:   19-Dec-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q6GEY1  (TENA_STAAR) -  Aminopyrimidine aminohydrolase from Staphylococcus aureus (strain MRSA252)
Seq:
Struc:
229 a.a.
225 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.3.5.99.2  - aminopyrimidine aminohydrolase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction:
1. 4-amino-5-aminomethyl-2-methylpyrimidine + H2O = 4-amino-5- hydroxymethyl-2-methylpyrimidine + NH4+
2. thiamine + H2O = 5-(2-hydroxyethyl)-4-methylthiazole + 4-amino-5- hydroxymethyl-2-methylpyrimidine + H+
4-amino-5-aminomethyl-2-methylpyrimidine
+ H2O
= 4-amino-5- hydroxymethyl-2-methylpyrimidine
+ NH4(+)
thiamine
+ H2O
= 5-(2-hydroxyethyl)-4-methylthiazole
+ 4-amino-5- hydroxymethyl-2-methylpyrimidine
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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