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PDBsum entry 3v9c

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protein ligands metals links
Oxidoreductase PDB id
3v9c

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
499 a.a.
Ligands
NAG-NAG-BMA-MAN-
MAN-MAN-MAN
NAG-NAG-BMA
NAG-NAG
_CU-OXY
NAG
Metals
_CU ×3
Waters ×522
PDB id:
3v9c
Name: Oxidoreductase
Title: Type-2 cu-depleted fungus laccase from trametes hirsuta at low dose of ionization radiation
Structure: Laccase. Chain: a. Fragment: unp residues 22-520. Ec: 1.10.3.2
Source: Trametes hirsuta. White-rot fungus. Organism_taxid: 5327
Resolution:
2.00Å     R-factor:   0.163     R-free:   0.200
Authors: K.M.Polyakov,T.V.Fedorova,S.A.Kurzeev,A.N.Popov,V.S.Lamzin, O.V.Koroleva
Key ref: K.M.Polyakov et al. Crystal structure of t2-Depleted fungal laccase from trametes hirsuta 072 at low and high dose of ionizati radiation. To be published, .
Date:
26-Dec-11     Release date:   22-Feb-12    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
B2L9C1  (B2L9C1_TRAHI) -  Laccase from Trametes hirsuta
Seq:
Struc:
 
Seq:
Struc:
520 a.a.
499 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.1.10.3.2  - laccase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: 4 hydroquinone + O2 = 4 benzosemiquinone + 2 H2O
4 × hydroquinone
+
O2
Bound ligand (Het Group name = OXY)
corresponds exactly
= 4 × benzosemiquinone
+ 2 × H2O
      Cofactor: Cu cation
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

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