spacer
spacer

PDBsum entry 3aal

Go to PDB code: 
protein ligands metals links
Hydrolase PDB id
3aal

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
298 a.a. *
Ligands
CAC
Metals
_ZN
_FE ×2
Waters ×110
* Residue conservation analysis
PDB id:
3aal
Name: Hydrolase
Title: Crystal structure of endonuclease iv from geobacillus kaustophilus
Structure: Probable endonuclease 4. Chain: a. Synonym: endoiv, endonuclease iv, endodeoxyribonuclease iv. Engineered: yes
Source: Geobacillus kaustophilus. Organism_taxid: 1462. Gene: gk2474. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
1.60Å     R-factor:   0.197     R-free:   0.222
Authors: R.Asano,H.Ishikawa,S.Nakane,N.Nakagawa,S.Kuramitsu,R.Masui,Riken Structural Genomics/proteomics Initiative (Rsgi)
Key ref: R.Asano et al. (2011). An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA. Acta Crystallogr D Biol Crystallogr, 67, 149-155. PubMed id: 21358045
Date:
20-Nov-09     Release date:   01-Dec-10    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q5KX27  (END4_GEOKA) -  Probable endonuclease 4 from Geobacillus kaustophilus (strain HTA426)
Seq:
Struc:
299 a.a.
298 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.3.1.21.2  - deoxyribonuclease Iv.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Endonucleolytic cleavage to 5'-phosphooligonucleotide end-products.

 

 
Acta Crystallogr D Biol Crystallogr 67:149-155 (2011)
PubMed id: 21358045  
 
 
An additional C-terminal loop in endonuclease IV, an apurinic/apyrimidinic endonuclease, controls binding affinity to DNA.
R.Asano, H.Ishikawa, S.Nakane, N.Nakagawa, S.Kuramitsu, R.Masui.
 
  ABSTRACT  
 
No abstract given.

 

 

spacer

spacer