spacer
spacer

PDBsum entry 2zyt

Go to PDB code: 
protein ligands links
Transferase PDB id
2zyt

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
291 a.a. *
Ligands
PPS
GOL ×2
Waters ×229
* Residue conservation analysis
PDB id:
2zyt
Name: Transferase
Title: Crystal structure of mouse cytosolic sulfotransferase msult1d1 complex with paps
Structure: Tyrosine-ester sulfotransferase. Chain: x. Fragment: residues 1-295. Synonym: cytosolic sulfotransferase, msult1d1. Engineered: yes
Source: Mus musculus. Mouse. Organism_taxid: 10090. Gene: sult1d1. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Resolution:
1.55Å     R-factor:   0.192     R-free:   0.210
Authors: T.Teramoto,Y.Sakakibara,M.-C.Liu,M.Suiko,M.Kimura,Y.Kakuta
Key ref: T.Teramoto et al. (2009). Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate. Biochem Biophys Res Commun, 383, 83-87. PubMed id: 19344693
Date:
29-Jan-09     Release date:   21-Apr-09    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q3UZZ6  (ST1D1_MOUSE) -  Sulfotransferase 1 family member D1 from Mus musculus
Seq:
Struc:
295 a.a.
291 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.8.2.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

 

 
Biochem Biophys Res Commun 383:83-87 (2009)
PubMed id: 19344693  
 
 
Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate.
T.Teramoto, Y.Sakakibara, M.C.Liu, M.Suiko, M.Kimura, Y.Kakuta.
 
  ABSTRACT  
 
We report the crystal structure of mouse sulfotransferase, mSULT1D1, complexed with donor substrate 3'-phosphoadenosine 5'-phosphosulfate and accepter substrate p-nitrophenol. The structure is the first report of the native Michaelis complex of sulfotransferase. In the structure, three proposed catalytic residues (Lys48, Lys106, and His108) were in proper positions for engaging in the sulfuryl transfer reaction. The data strongly support that the sulfuryl transfer reaction proceeds through an S(N)2-like in-line displacement mechanism.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
21188624 M.M.Hossain, Y.Moriizumi, S.Tanaka, M.Kimura, and Y.Kakuta (2011).
Molecular cloning, expression, and functional analysis of a predicted sulfotransferase STF9 from Mycobacterium avium.
  Mol Cell Biochem, 350, 155-162.  
20136513 G.Malojcić, and R.Glockshuber (2010).
The PAPS-independent aryl sulfotransferase and the alternative disulfide bond formation system in pathogenic bacteria.
  Antioxid Redox Signal, 13, 1247-1259.  
20462768 L.M.Danan, Z.Yu, P.J.Ludden, W.Jia, K.L.Moore, and J.A.Leary (2010).
Catalytic mechanism of Golgi-resident human tyrosylprotein sulfotransferase-2: a mass spectrometry approach.
  J Am Soc Mass Spectrom, 21, 1633-1642.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

spacer

spacer